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Experiment Accession: 11300
Experiment Accession11300
Project nameAtGenExpress
OrganismArabidopsis thaliana
Data SourceRZPD
Experiment Category abiotic treatment, tissue comparison
Experiment Goals response to no stress
Experimental Variables control, tissue, time course
Is series?time course
environment is variable?True
sample material is variable?False
probe type is variable?False
harvesting is variable?True
Experiment Namebasic abiotic stress treatment
Experiment DescriptionThis experiment serves as a control for the other experiments of the same project which are studying the effect of different abiotic stresses on the expression of genes in the shoot and root tissue of 16 days old Arabidopsis thaliana seedlings of Columbia-0 ecotype regarding a time course (0h; 0,25h; 0,5h; 1h; 3h; 4h; 6h; 12h; 24h). The applied stresses are: cold stress, osmotic stress, salt stress, drought stress, oxidative stress, genotoxic stess, UV-B stress, wounding stress and heat stress. We collected 18 samples in duplicate serving as none stress controls for the respective samples from the stressed plants in the time course (0h; 0,25h; 0,5h; 1h; 3h; 4h; 6h; 12h; 24h) after the treatment. The expression data of the samples were generated at the RZPD in Berlin using the ATH1 chip from Affymetrix. The study is part of the AtGenExpress project which is funded by the DFG. This global approach will provide a great amount of additional expression data for the Arabidopsis community.
Number of Replicate Sets18
Number of BioSamples18
Number of Slides36
Commentscontrol experiment for: 11300, 11400, 11500, 11600, 11700, 11800, 11900, 12000, 12100, 12200,