The Comprehensive Systems Biology Project (CSB)
- A Comprehensive Systems-Biology Database -
Hosted at Max Planck Institute of Molecular Plant Physiology
Databases: Associated DB | Transcriptome DB | Metabolome DB | Co-Response DB | BestFit
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NOTIFICATION: Permanent migration of all CSB.DB services and functionalities on 1.1.2016.
Herewith we inform you that all CSB.DB databases have been migrated at the beginning of 2016. This includes all gene correlation and expression databases, the GMD@CSB.DB module and all associated databases
The BestFit software, a tool for non-aqueous fractionation data analysis, will also be available by the Experimental Systems Biology Research Group headed by Dr. Patrick Giavalisco.
We thank all users, contributors, and collaborators of CSB.DB at the Max Planck Institute for their long-standing support.
Yours sincerely, the CSB.DB Curator and the CSB.DB Developmental Core Team
BestFit - a tool for non-aqueous fractionation data analysis
BestFit is a C-language command line tool for calculation and evaluation of subcellular metabolite distributions from non-aqueous fractionation (NAF) data. To download the recent version of BestFit (v1.2), please use the links given below.

Please cite:
Analysis of the compartmentalized metabolome - a validation of the non-aqueous fractionation technique. Front. Plant Sci., 2:55. doi: 10.3389/fpls.2011.00055. [Front. Plant Sci.]

Further reading:
A Topological Map of the Compartmentalized Arabidopsis thaliana Leaf Metabolome. PLoS One , 6(3), e17806. [PubMed] [Plos One]

Type Name Version Description Download
C-command line tool BestFit 1.20 (Build 25.04.2011) Compiled for Windows under Cygwin 2.738.

For suggestions and questions feel free to contact the CSB.DB curator.
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