The Comprehensive Systems Biology Project (CSB)
csbdb GMD@CSB.DB
- The Golm Metabolome Database -
Hosted at Max Planck Institute of Molecular Plant Physiology
Databases: Associated DB | Transcriptome DB | Metabolome DB | Co-Response DB | BestFit
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NOTIFICATION: GMD has been migrated and will permanently be maintained on private servers.
Herewith we inform you that all CSB.DB databases have been migrated and associated services will be maintained on private servers since the beginning of 2016. This includes all gene correlation and expression databases (search the WWW for alternatives), the GMD@CSB.DB module (alternative will be reachable via and all associated databases (terminated).
The BestFit software, a tool for non-aqueous fractionation data analysis, will be available by the Experimental Systems Biology Research Group headed by Dr. Patrick Giavalisco.
GMD@CSB.DB: Metabolite Profiling Search
The Profiling Search (sMPQ)
Info. | Help |
Metabolite Profiling Search - The Single Metabolite Query (sMPQ):
allows to search for changing metabolite / compound level in profiling experiments
1. Compound
Compound Type info
2. Organism  
3. Profile Sets  
  quadrupole GC-MS
4. RI Regression  
  3.1. RI window wide (+/-)
5. Area Filter  
  4.1. Min. Area Thresh. 4.2 Max. Area Thresh.
6. Match Filter  
  5.1. For. Match Thresh. 5.2 Rev. Match Thresh.
7. Statistics  
  median with relative median deviation     mean with relative standard deviation
  Wilcoxon's two-sample test     t-test (equal / unequal variance)

For suggestions and questions feel free to contact the CSB.DB curator.
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