Major updates of CSB.DB will be done quarterly. Furthermore minor updates will be done monthly. This page gives an overview about new features, latest changes and the history of updates.
To get information of your choice use the links listed below.
Update Version:
2004-05-31: CSB.DB 06.04 Enhancements
Next Update:
2004/07: CSB.DB 08.04 Enhancements
General:
# HTML: General changes in HTML layout and location of CSB.DB for faster access and a more user friendly interface. HTML pages are reduced in size for faster download. Moreover the left navigation bar changed according the selected database@CSB.DB and currently contain navigation to main query pages for each database.
# Integration of word search and functional neigbourhood search (FN-Search) for all currently supported organisms, namely
E.coli,
S.cerevisiae, and
A.thaliana. A grapical output of the word search and the FN-Search is obtained at the end of each co-response table for the Single gene and the Intersection Gene Query tool.
# Implementation of the CoRNetApplet - The Co-Response Network Applet. Now you can perform network visualization for a set of genes at the Multiple Gene Query tool. Java version 1.4 or higher is required. A
tutorial is available.
# The Mutual Information (converted into distance range) and the Euclidean distance are additional available if you perform a single or a multiple Gene Query tool. Both distances as well as the confidence interval and the power of the test for the choosen correlation coefficient will be available if you click on 'SHOW' in the result page (see
help).
# Download: Matrix and experiment information can be freely downloaded.
# AthCoR@CSB.DB: Rename of the A.thaliana Co-Response Database: formerly known as ACoR@CSB.DB
# Multiple Gene Query tool: CoRNetApplet implementation
# SceCoR@CSB.DB: Rename of the S.cerevisiae Co-Response Database: formerly known as SCoR@CSB.DB
# Multiple Gene Query tool: CoRNetApplet implementation
# Single / Intersection Gene Query tool: Word Search & Functional Neigbourhood Search implementation
# EcoCoR@CSB.DB: Rename of the E.coli Co-Response Database: formerly known as ECoR@CSB.DB
# Multiple Gene Query tool: CoRNetApplet implementation
# Single / Intersection Gene Query tool: Word Search & Functional Neigbourhood Search implementation
# Integration of the Tomato mass spectra and retention time index library, which is now available an can be downloaded. This library can be used to identify metabolites from GC-MS / GC-TOF analyses. Library information and experiment description are available at MSRI@CSB.DB.
# Annotation of A.thaliana Subtilase Genes (AtSBTs) and additional information (sequences, co-response analysis) available.
